Snt25 530

[irautu-bluesquare]

Update params access to health care pipeline: https://bluesquare.atlassian.net/browse/SNT25-530

Changes:

• worldpopclient.py
  • new file to create WorldPop clien: copied shamelessly from MAP extract pipeline
• pipeline.py
  • remove params for input shapes, input population and custom radius and adapt code
  • add param for input WorldPop year
    • validate year
    • if data for that year exists, use that; if not, try to download from WorldPop
  • validate input FOSA file type
  • use worldpopclient.py
  • new functions:
    • has_allowed_extension (to check FOSA input extension)
    • get_or_download_worldpop_raster (uses worldpopclient.py)
    • retrieve_shapes (no more param)
• snt_utils.r
  • removed 2 functions (both make coverage radius from the "utils"; one moved to snt_healthcare_access.r, one not used anymore)
• snt_healthcare_access.r
  • added the function to make coverage radii from snt_utils.r
• snt_healthcare_access_report
  • added the ovelaid FOSA with radii plot
  • added common SNT formatting to it (title format/size, theme, etc.)
• snt_healthcare_access.ipynb
  • update for the new params/process
• snt_healthcare_access_report.ipynb
  • update for the new params/process
  • add an option to specify in plots when user data inputs are used
• readme.md
  • update document for the new params/process

Examples of runs



snt_healthcare_access_report_OUTPUT_2026-06-22_084832.zip

[EstebanMontandon]

If the pipeline has been tested in the snt-testing , then is ready to be merged ;)

[EstebanMontandon]

You could also do something like:

if input_fosa_file is None:
    current_run.log_info("Using default FOSA data (DHIS2).")
elif not Path(input_fosa_file.path).exists():
    current_run.log_warning("User provided file not found, check the path.")
elif not has_allowed_extension(input_fosa_file):
    current_run.log_warning("FOSA location file should be a .csv file. Using default FOSA data instead.")
else:
    current_run.log_info(f"Using FOSA coordinates file: {input_fosa_file.path}")