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Save BiocPy objects as RDS files#76

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jkanche wants to merge 14 commits into
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save-rds
Draft

Save BiocPy objects as RDS files#76
jkanche wants to merge 14 commits into
masterfrom
save-rds

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@jkanche

@jkanche jkanche commented Jun 16, 2026

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@jkanche jkanche self-assigned this Jun 16, 2026
@jkanche jkanche changed the title Implement saving BiocPy objects as RDS files Save BiocPy objects as RDS files Jun 16, 2026
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codecov Bot commented Jun 16, 2026

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Codecov Report

❌ Patch coverage is 73.78641% with 81 lines in your changes missing coverage. Please review.
✅ Project coverage is 77.92%. Comparing base (9c5c13b) to head (6890094).

Files with missing lines Patch % Lines
src/rds2py/save_compressed_list.py 53.33% 11 Missing and 3 partials ⚠️
src/rds2py/save_se.py 60.00% 10 Missing and 2 partials ⚠️
src/rds2py/save_granges.py 73.17% 5 Missing and 6 partials ⚠️
src/rds2py/save_delayed_matrix.py 47.36% 9 Missing and 1 partial ⚠️
src/rds2py/save_mae.py 47.36% 9 Missing and 1 partial ⚠️
src/rds2py/save_factor.py 61.53% 5 Missing ⚠️
src/rds2py/save_rle.py 73.68% 2 Missing and 3 partials ⚠️
src/rds2py/save_sce.py 73.68% 2 Missing and 3 partials ⚠️
src/rds2py/save_atomic.py 91.11% 0 Missing and 4 partials ⚠️
src/rds2py/save_frame.py 82.35% 1 Missing and 2 partials ⚠️
... and 1 more
Additional details and impacted files
@@            Coverage Diff             @@
##           master      #76      +/-   ##
==========================================
- Coverage   80.16%   77.92%   -2.25%     
==========================================
  Files          17       29      +12     
  Lines         610      915     +305     
  Branches       93      135      +42     
==========================================
+ Hits          489      713     +224     
- Misses         75      130      +55     
- Partials       46       72      +26     

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