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Pull requests: DataBiosphere/azul

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Pull requests list

Backport: 41d9567 (#7070, PR #8111), 4d9fd43 (#8112, PR #8105)
#8123 opened Jun 18, 2026 by dsotirho-ucsc Contributor Loading…
16 of 59 tasks
2
@dsotirho-ucsc
2
Fix: SA handover issue template lacks items for requester-pays workspaces (#8109)
#8119 opened Jun 12, 2026 by nadove-ucsc Contributor • Draft 100+
1
@nadove-ucsc
4
Deindex datasets from the AnVIL catalog (#8097) reindex:anvilprod [process] PR requires reindexing anvilprod reindex:partial [process] PR allows for (de)indexing a specific source or catalog
#8116 opened Jun 12, 2026 by dsotirho-ucsc Contributor Loading… 100+
1
@dsotirho-ucsc
4
Fix: GH Action schedule failed to create promotion ticket (#8041)
#8110 opened Jun 11, 2026 by achave11-ucsc Member • Draft 100+
1
@achave11-ucsc @dsotirho-ucsc
2
Fix: False-positive SQL Injection finding (DataBiosphere/azul-private#387)
#8089 opened Jun 8, 2026 by achave11-ucsc Member Loading… 100+
@achave11-ucsc
5
Fix: File.size should not be optional (#8024) API API change affecting callers
#8081 opened Jun 3, 2026 by nadove-ucsc Contributor Loading… 100+
1
@hannes-ucsc @nadove-ucsc
6
Organize curl downloads by dataset (#7926)
#8056 opened May 27, 2026 by dsotirho-ucsc Contributor • Draft 100+
1
@dsotirho-ucsc
3
Fix: Redundant implementations of file URLs and mirror URIs (#8042)
#8043 opened May 21, 2026 by nadove-ucsc Contributor • Draft 100+
1
@nadove-ucsc
2
Fix: curl manifest futilely includes external LungMAP files (#8027) 3 reviews [process] Lead requested changes thrice
#8030 opened May 15, 2026 by nadove-ucsc Contributor Loading… 100+
1
@nadove-ucsc
23
Cover query service with mypy (#6821) 1 review [process] Lead requested changes once partial [process] PR is does not completely resolve associated ticket
#7916 opened Apr 8, 2026 by nadove-ucsc Contributor Loading… 100+
1
@nadove-ucsc
8
Fix: Manifest IT fails with pinned seed (#7835)
#7850 opened Mar 10, 2026 by nadove-ucsc Contributor Loading… 100+
1
@nadove-ucsc
7
Fix: OpenSearch queries are huge (azul-private#316) 1 review [process] Lead requested changes once
#7775 opened Feb 12, 2026 by nadove-ucsc Contributor Loading… 100+
@nadove-ucsc
13
Fix: Eliminate uses of requests library (#7633) 1 review [process] Lead requested changes once partial [process] PR is does not completely resolve associated ticket
#7745 opened Feb 4, 2026 by achave11-ucsc Member Loading… 100+
1
@hannes-ucsc @achave11-ucsc
48
OpenSearch queries include many redundant source IDs (#7644)
#7727 opened Jan 29, 2026 by nadove-ucsc Contributor • Draft 100+
1
@nadove-ucsc
1
Fix: Accumulator overflow during aggregation (#6793) 1 review [process] Lead requested changes once API API change affecting callers reindex:anvildev [process] PR requires reindexing anvildev reindex:anvilprod [process] PR requires reindexing anvilprod reindex:dev [process] PR requires reindexing dev reindex:prod [process] PR requires reindexing prod
#7641 opened Dec 12, 2025 by dsotirho-ucsc Contributor Loading… 100+
1
@dsotirho-ucsc
47
Make GitLab instance CIS level 2 compliant (#5990)
#6694 opened Nov 8, 2024 by dsotirho-ucsc Contributor • Draft 100+
1
@dsotirho-ucsc
2
Fix: Can't use curl to download a single manifest in one invocation (#5918) 4+ reviews [process] Lead requested changes four times or more API API change affecting callers
#6099 opened Mar 26, 2024 by dsotirho-ucsc Contributor Loading… 100+
1
@dsotirho-ucsc
107
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