GitHub - LIMLabSWC/x_detection_ephys_analysis

Branches Tags

Name		Name	Last commit message	Last commit date
Latest commit History 42 Commits
LFADS		LFADS
TimeSeries_clasification		TimeSeries_clasification
log		log
add_stage_to_sess_top.py		add_stage_to_sess_top.py
aggr_abstraction.py		aggr_abstraction.py
aggr_normdev.py		aggr_normdev.py
aggr_passive_sess.py		aggr_passive_sess.py
aggr_rare_freq.py		aggr_rare_freq.py
aggregate_abstraction_sessions_analysis.py		aggregate_abstraction_sessions_analysis.py
aggregate_decoding_analysis.py		aggregate_decoding_analysis.py
aggregate_ephys_funcs.py		aggregate_ephys_funcs.py
aggregate_psth_analysis.py		aggregate_psth_analysis.py
aggregate_rare_freq_psth_decoding.py		aggregate_rare_freq_psth_decoding.py
aggregrate_bad_units.py		aggregrate_bad_units.py
aggregrate_ephys_dev_ABAD.py		aggregrate_ephys_dev_ABAD.py
aggregrate_ephys_dev_ABBA1.py		aggregrate_ephys_dev_ABBA1.py
aggregrate_ephys_fam.py		aggregrate_ephys_fam.py
aggregrate_ephys_normdev.py		aggregrate_ephys_normdev.py
aggregrate_pip_by_pip_analysis.py		aggregrate_pip_by_pip_analysis.py
aggregrate_pip_by_pip_analysis_rare_freq.py		aggregrate_pip_by_pip_analysis_rare_freq.py
behviour_analysis_funcs.py		behviour_analysis_funcs.py
ch1_beh_fig.py		ch1_beh_fig.py
ch1_lick_refinement_fig.py		ch1_lick_refinement_fig.py
ch1_processing_schemas.py		ch1_processing_schemas.py
ch2_pupil_fig.py		ch2_pupil_fig.py
ch_2_pupil_rare_alt_norm_analysis - Copy.py		ch_2_pupil_rare_alt_norm_analysis - Copy.py
ch_2_pupil_rare_alt_norm_analysis.py		ch_2_pupil_rare_alt_norm_analysis.py
config.yaml		config.yaml
config_d_sided.yaml		config_d_sided.yaml
config_edmund.yaml		config_edmund.yaml
data_check_funcs.py		data_check_funcs.py
decoding_acc_across_sess_analysis.py		decoding_acc_across_sess_analysis.py
decoding_funcs.py		decoding_funcs.py
dev_ABCD_ABBA_sim_over_pips.py		dev_ABCD_ABBA_sim_over_pips.py
ephys_analysis.py		ephys_analysis.py
ephys_analysis_funcs.py		ephys_analysis_funcs.py
ephys_analysis_multisess.py		ephys_analysis_multisess.py
ephys_unit_analysis.py		ephys_unit_analysis.py
gen_batch_sess_responses.py		gen_batch_sess_responses.py
gen_p1d_probe.ipynb		gen_p1d_probe.ipynb
generate_channel_order.ipynb		generate_channel_order.ipynb
generate_synthetic_spikes.py		generate_synthetic_spikes.py
human_normdev_analysis.py		human_normdev_analysis.py
human_pupil_analysis.py		human_pupil_analysis.py
installed_packages.txt		installed_packages.txt
io_utils.py		io_utils.py
kcsd_funcs.py		kcsd_funcs.py
lick_analysis_multisess.py		lick_analysis_multisess.py
match_sorting.py		match_sorting.py
meta_analysis_scripts.py		meta_analysis_scripts.py
multi_sess_analysis.py		multi_sess_analysis.py
musc_2501_analysis.py		musc_2501_analysis.py
musc_pupil_analysis.py		musc_pupil_analysis.py
muscimol_fig.py		muscimol_fig.py
neural_similarity_funcs.py		neural_similarity_funcs.py
opto_perf_analysis.py		opto_perf_analysis.py
opto_pupil_analysis.py		opto_pupil_analysis.py
pip_packages.txt		pip_packages.txt
plot_funcs.py		plot_funcs.py
plot_motion.py		plot_motion.py
population_analysis_funcs.py		population_analysis_funcs.py
post_process.py		post_process.py
postprocessing.py		postprocessing.py
postprocessing_utils.py		postprocessing_utils.py
pre_post_analysis.py		pre_post_analysis.py
process_recording.py		process_recording.py
psychophysicsUtils.py		psychophysicsUtils.py
pupil_analysis_funcs.py		pupil_analysis_funcs.py
quick_pupil_analsysis.py		quick_pupil_analsysis.py
reformat_dir_struct.py		reformat_dir_struct.py
regression_funcs.py		regression_funcs.py
run_ephys_analysis.bat		run_ephys_analysis.bat
run_ephys_analysis.sh		run_ephys_analysis.sh
run_post_process_slurm.sh		run_post_process_slurm.sh
run_sorter_slurm.sh		run_sorter_slurm.sh
run_sorter_slurm_fast.sh		run_sorter_slurm_fast.sh
run_split_slurm.sh		run_split_slurm.sh
save_utils.py		save_utils.py
sess_dataclasses.py		sess_dataclasses.py
sorting_functions.py		sorting_functions.py
spike_sorting.yaml		spike_sorting.yaml
spike_time_utils.py		spike_time_utils.py
split_concat.py		split_concat.py
submit_sort_jobs.py		submit_sort_jobs.py
summary_stats_scripts.py		summary_stats_scripts.py
sythesise_spikes.py		sythesise_spikes.py
unit_analysis.py		unit_analysis.py